Agenda
WEDNESDAY, OCTOBER 13, 2021
| WELCOME (11:00 a.m. – 11:20 a.m.) | |
|---|---|
| 11:00 a.m. - 11:20 a.m. | CPTAC Status Update Henry Rodriguez, Ph.D., M.B.A. National Cancer Institute, NIH |
| SESSION I - Tumor Characterization (11:20 a.m. - 12:50 p.m.) | |
| 11:20 a.m. -11:50 a.m. | Proteogenomic Characterization of Pancreatic Ductal Adenocarcinoma Hui Zhang, Ph.D., Johns Hopkins School of Medicine |
| 11:50 a.m. - 12:20 p.m. | A Proteogenomic Portrait of Lung Squamous Cell Carcinoma Michael Gillette, M.D., Ph.D., Broad Institute |
| 12:20 p.m. - 12:50 p.m. | Proteogenomic and Metabolomic Characterization of Human Glioblastoma Milan G. Chheda, M.D., Washington University School of Medicine |
| 12:50 p.m. - 1:30 p.m | Lunch |
| SESSION II - Translational Studies (1:30 p.m. - 2:15 p.m.) | |
| 1:30 p.m. - 2:00 p.m. | Evolution of Resistance to FLT3 Inhibitors in AML, a Comparison of Gilteritinib And Quizartinib (Partnership with BEAT AML Master Clinical Trial) Elie Traer M.D., Ph.D., Oregon Health & Science University |
| 2:00 p.m. - 2:15 p.m. | Development of Targeted Proteomics Assays to Aid Immunotherapy in Cancer Jeff Whiteaker, Ph.D., Fred Hutchinson Cancer Research Center |
| SESSION III - Data Analysis Tool (2:15 p.m. - 3:50 p.m.) | |
| 2:15 p.m. - 2:30 p.m. | An Updated Overview of CPTAC Analysis Tools Bing Zhang, Ph.D., Baylor College of Medicine |
| Live Demo- | |
| 2:30 p.m. - 2:50 p.m. | FragPipe Computational Pipeline Alexey I. Nesvizhskii, Ph. D., University of Michigan |
| 2:50 p.m. - 3:10 p.m. | ProTrack-Kinase Activity Portal: A Tool to Query/Visualize/Download Kinase Activity Scores of Multiple Cancer Types Anna Calinawan, Icahn School of Medicine at Mount Sinai |
| 3:10 p.m. - 3:30 p.m. | BayesDebulk: A New Deconvolution Analysis Method to Infer Cell-Type Composition in Bulk Tissue Using Proteogenomic Data Francesca Petralia, Ph.D., Icahn School of Medicine at Mount Sinai |
| 3:30 p.m. - 3:50 p.m. | Deep Learning-Based Retention Time Prediction for Modified Peptides Bo Wen, Baylor College of Medicine |
| 3:50 p.m. | Adjourn |